Type de formation:
Formation professionnelle
Description:
This course offers to develop and enhance advanced Linux shell command line and scripting skills for the processing and analysis of NGS data. We will work on a HPC server and use linux powerful commands to allow to analyze big amount of biological data.
Prerequisites
Basic knowledge of Linux (Linux for dummies required)
Program
- Connecting to a distant HPC
- Manipuling text files
- Complex searching for text in a file
- Combining several commands
- Writing simple shell scripts
Learning objectives
After this course, participants should be able to:
- Manipulate and search within text files
- Chain and combine commands
- Perform the same actions on many files
- Write a simple shell script
Instructors
- Christine Tranchant (CT) - christine.tranchant@ird.fr
- Ndomassi Tando (NT) - ndomassi.tando@ird.fr
- Bruno Granouillac (BG) - bruno.granouillac@ird.fr
- François Sabot (SB) - francois.sabot@ird.fr
- Gautier Sarah (GS) - gautier.sarah@cirad.fr
Reccurance:
Oui
Lien vers la formation:
Date de la session:
Mardi, mars 13, 2018 (All day)
Lieu de la formation:
Centre IRD, Montpellier
Cours résumé:
This course offers to develop and enhance advanced Linux shell command line and scripting skills for the analysis of NGS data.
Date de la session:
Lundi, décembre 17, 2018
Nombre de jours:
1.00
Nombre de participants académiques:
24
Opérateur de la formation:
South Green Platform
Participation:
Gratuite
Taux de satisfaction des apprenants:
85%
Organisateurs:
South Green Platform
