Type de formation: 
Formation professionnelle
Description: 

This course offers to develop and enhance advanced Linux shell command line and scripting skills for the processing and analysis of NGS data. We will work on a HPC server and use linux powerful commands to allow to analyze big amount of biological data.

 

Prerequisites

Basic knowledge of Linux (Linux for dummies required)

Program

  • Connecting to a distant HPC
  • Manipuling text files
  • Complex searching for text in a file
  • Combining several commands
  • Writing simple shell scripts

Learning objectives

After this course, participants should be able to:

  • Manipulate and search within text files
  • Chain and combine commands
  • Perform the same actions on many files
  • Write a simple shell script

 

Instructors

Reccurance: 
Oui
Date de la session: 
Mardi, mars 13, 2018 (All day)
Lieu de la formation: 
Centre IRD, Montpellier
Cours résumé: 
This course offers to develop and enhance advanced Linux shell command line and scripting skills for the analysis of NGS data.
Date de la session: 
Lundi, décembre 17, 2018
Nombre de jours: 
1.00
Nombre de participants académiques: 
24
Opérateur de la formation: 
South Green Platform
Participation: 
Gratuite
Taux de satisfaction des apprenants: 
85%
Organisateurs: 
South Green Platform
cea
cnrs
inrae
inria
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